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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907727.1_cds_XP_016457849.1_51533
CDS Infomation

[gene=LOC107781630] [db_xref=GeneID:107781630] [protein=probable galactinol--sucrose galactosyltransferase 6] [protein_id=XP_016457849.1] [location=join(55259..55450,56240..57579,58227..58436,58721..58855,59375..60065)] [gbkey=CDS]
Sequence

ATGTTTCAACTCAGTTCTATTTCTGTCCATCGTCTCAACCCCTTCATTATTACTACTATA
AATAGCCAAATCCAAAAGCTAATTCCCACGCCCTTCTCTTCCCCAATAACCCATTTTCCC
AACTCATTAACCAAATCCATTATTCCTTTTCGATCCTCTGTTTCGTCACTTCCTTCAATT
CTTGCTCACAAAGGAAGTGAAGTTGAGTTTGAGAAGGAGGTCGAGGAGGAGGAATCCGCT
ATGACGATTACTCCAGCGATTAGAATTTCCAATAGGAAGCTGGTGATAAAAGACAGAACA
ATATTAACGAATGTACCAGACAATGTAATTACCACTTCTGGTGCAGCATCAGGTCCAGTG
GAAGGTGTATTTATAGGTGCGGAATTCGATCAAGAAAACAGCCGCCATGTCGTGCCGTTA
GGAAAATTACAGGATGTTAAATTCTTATCTTGTTTCAGGTTCAAATTATGGTGGATGGCT
CAAAAAATGGGTGACAAAGGAAGTGAGATTCCACTGGAAACCCAATTTTTACTTGTCGAA
ACCAAAGATGGGTCCCACCTCGGATCCGATAACAACAACAACAATGACAATAATATTGTT
TATGCGGTTTTCCTTCCATTAATTGAAGGTTCATTTCGAGCTGTTCTTCAAGGGAATCCT
GAAGACGAGCTCGAATTGTGCCTCGAGAGCGGGGATAAGGATACTGTCGGCTCGGCATTT
AATCAAGCAGTTTATGTGCATGCTGGCTGTGATCCGTTTATTGTTATTACAGAGGCGATA
AGGGCAGTGAAATTACACCTCAAGACTTTCCGGCAACGGCATGAGAAGAAACTCCCCGGA
ATTGTTGATTACTTCGGGTGGTGTACGTGGGATGCTTTTTACCAAGAAGTTACTCAAGAA
GGCGTTGAAGCCGGCCTTGAAAGTCTCACTGCCGGCGGAGTACCGCCAAAGTTCGTCATC
ATCGATGACGGTTGGCAATCCGTCGGCGCAGACATGGAAGTTGAAAAGCCGTTAATGAGA
CTTACTGGATTAAAAGAAAATGAGAAGTTTCAGAAGAACAAAGATCCAACCGTGGGGATT
AAAAACATTGTGAATATAGCTAAAGAAAAATACGGATTGAATTACGTGTACGTGTGGCAC
GCGATAACAGGTTATTGGGGCGGGGTCCGACCCGGAGTGAAGGGGATGGAGGAATACGGG
TCGGTTATGAAGTATCCGGAGATTACGAAAGGGGTGATGGAAAACGAACCGGGTTGGAAA
ACGGATGCGATTGCGGTTCAGGGTTTAGGTTTGGTTAACCCGAAAAGTGCTTATAAGTTT
TATAATGAAATGCATAGTTATTTGGCATCAGCTGGGGTAGATGGATTGAAGGTGGATGTT
CAGTGTATATTGGAGACCCTAGGGGGTGGCTTAGGGGGTCGGGTTGAACTCACAAAACAG
TATCATCAAGCTCTTGATGCTTCTGTTTCTAAGAACTTCCCCGATAATGGTTGCATTGCT
TGCATGAGTCACAGCACTGATGCACTTTACTGCTCAAAGCAGACAGCTGTTGTAAGAGCA
TCAGATGACTTCTATCCAAGAGATCCAATCTCACACACCATTCACATTGCTTGTGTGGCA
TACAACAGTGTGTTCCTTGGAGAAATTATGGTGCCTGATTGGGACATGTTCCACTCCCTT
CATCCAGCTGCCGAGTATCACGGCTCGGCCAGGGCGTTGAGTGGTGGACCTGTCTATGTT
AGTGATGCACCTGGCAAGCACAACTTTGATGTCCTAAGGAAGCTTGTTCTCCGAGATGGT
TCAATTCTTCGAGCTCGTTTGCCTGGTCGACCTACAAAGGATTCCCTTTTCTCCGATCCT
TCTCGGGATGGTGTTAGCCTCTTGAAGATATGGAACATGAACAAATACACTGGTGTGCTT
GGAGTATACAACTGCCAAGGTGCAGCATGGAACACAGTTGAAAGGAAGAACACATTCCAC
CAAACTAATTCCGAGGCGATAACAGGCTATGTTAGGGGCCGCGATGTCCATTTCATATCT
GAAGCTTCCGTAGACCCCAACTGGATTGGAGACTGTGCTCTTTACTCCAATGTGCGCGCT
GAGCTTGTTGTTCTCCCTCACAATGCAGCGATTCCTATTTCTTTGAAGGTCCTCGAGCAC
GAGACGTACACTGTTACACCTATTCAGGTCTTGGCACCTGGCTTCAGCTTTGCACCATTG
GGGCTCATTGACATGTACAATGCTGGTGGGGCAATCGAGGGACTAAAATACGAGGTAAAG
GCAGGCGCAGAATTGTCTGAACTAGAGACTGGATACCAAGGCGAAGGAAATCTTGTTGCT
GAAGATAGAATCGAGAACTTGAGCACAGAAGCAGTTGCAGTAGTGTCGATGGAAGTAAAG
GGGTGTCATCGATTTGGTGCTTACTCGTCTGTCAAGCCAAGGAAGTGCACTGTTGGTAGA
AATATGGTTGACTTTGCCTACGACTCAGATTCTGGTTTGTTAACTCTGAATCTTGATGGT
ATGCCTCCAGTTGATCAGAAAGTGCATCTCATTGAAGTTGAAGTATAG

Peptide Sequence

PEP ID

XP_016457849.1
PEP Infomation

PREDICTED: probable galactinol--sucrose galactosyltransferase 6 [Nicotiana tabacum]
Sequence

MFQLSSISVHRLNPFIITTINSQIQKLIPTPFSSPITHFPNSLTKSIIPFRSSVSSLPSI
LAHKGSEVEFEKEVEEEESAMTITPAIRISNRKLVIKDRTILTNVPDNVITTSGAASGPV
EGVFIGAEFDQENSRHVVPLGKLQDVKFLSCFRFKLWWMAQKMGDKGSEIPLETQFLLVE
TKDGSHLGSDNNNNNDNNIVYAVFLPLIEGSFRAVLQGNPEDELELCLESGDKDTVGSAF
NQAVYVHAGCDPFIVITEAIRAVKLHLKTFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQE
GVEAGLESLTAGGVPPKFVIIDDGWQSVGADMEVEKPLMRLTGLKENEKFQKNKDPTVGI
KNIVNIAKEKYGLNYVYVWHAITGYWGGVRPGVKGMEEYGSVMKYPEITKGVMENEPGWK
TDAIAVQGLGLVNPKSAYKFYNEMHSYLASAGVDGLKVDVQCILETLGGGLGGRVELTKQ
YHQALDASVSKNFPDNGCIACMSHSTDALYCSKQTAVVRASDDFYPRDPISHTIHIACVA
YNSVFLGEIMVPDWDMFHSLHPAAEYHGSARALSGGPVYVSDAPGKHNFDVLRKLVLRDG
SILRARLPGRPTKDSLFSDPSRDGVSLLKIWNMNKYTGVLGVYNCQGAAWNTVERKNTFH
QTNSEAITGYVRGRDVHFISEASVDPNWIGDCALYSNVRAELVVLPHNAAIPISLKVLEH
ETYTVTPIQVLAPGFSFAPLGLIDMYNAGGAIEGLKYEVKAGAELSELETGYQGEGNLVA
EDRIENLSTEAVAVVSMEVKGCHRFGAYSSVKPRKCTVGRNMVDFAYDSDSGLLTLNLDG
MPPVDQKVHLIEVEV

Transcript Sequence

Gene sequence data has not been registered.